Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018511.1 Corchorus olitorius cultivar O-4 contig18544, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27552

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1955--2060
49
2.2
47
85
6
142
27
18
4
49
1.68
6534--6606
29
2.4
31
82
8
89
31
8
26
34
1.86
8391--8461
29
2.4
29
100
0
142
43
12
0
43
1.42
24865--24924
6
10.2
6
76
16
63
3
1
13
81
0.89
24864--24921
26
2.5
22
81
15
64
3
1
13
81
0.91
24885--24924
8
4.9
8
81
6
53
0
0
15
85
0.61

Tables:   1

The End!