Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018520.1 Corchorus olitorius cultivar O-4 contig18553, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27489

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
597--654
22
2.5
23
86
5
73
41
10
8
39
1.70
700--742
22
1.9
23
90
4
70
27
18
9
44
1.80
3757--3782
9
2.9
9
100
0
52
34
0
19
46
1.50
5391--5496
32
3.3
32
97
0
203
46
12
15
26
1.80
9090--9129
16
2.5
16
91
0
62
47
12
2
37
1.55
12351--12426
34
2.2
34
85
0
98
35
21
15
27
1.94
14125--14207
29
2.9
29
96
0
148
16
15
26
40
1.89
15801--15827
12
2.2
12
100
0
54
18
7
18
55
1.65
22695--22741
6
8.0
6
90
4
78
51
0
14
34
1.43

Tables:   1

The End!