Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018525.1 Corchorus olitorius cultivar O-4 contig18558, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31915

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2529--2563
15
2.2
16
90
5
54
14
5
11
68
1.37
6426--6466
15
2.4
18
80
15
52
56
0
0
43
0.99
9959--10126
86
2.0
86
90
3
268
53
0
10
35
1.39
9828--10260
216
2.0
216
94
0
749
51
2
9
35
1.48
10044--10288
130
1.9
130
88
1
375
51
2
11
35
1.52
10060--10314
130
2.0
130
85
3
343
52
3
10
33
1.52
19952--19984
16
2.1
16
94
0
57
15
27
18
39
1.90
24285--24348
31
2.1
31
100
0
128
53
15
12
18
1.73
30337--30406
20
3.5
20
74
14
81
41
15
17
25
1.89
30328--30416
40
2.2
40
100
0
178
39
17
17
24
1.92

Tables:   1

The End!