Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018526.1 Corchorus olitorius cultivar O-4 contig18559, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22196

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6023--6056
6
5.7
6
100
0
68
82
0
17
0
0.67
13586--13625
15
2.6
16
92
8
73
75
10
5
10
1.19
17866--17904
17
2.3
17
86
0
51
38
0
2
58
1.12
17873--17907
17
2.1
17
94
0
61
40
0
0
60
0.97
20188--20224
2
18.5
2
100
0
74
48
0
0
51
1.00
21032--21161
45
2.9
45
97
0
242
37
20
7
33
1.82
22171--22196
1
26.0
1
100
0
52
100
0
0
0
0.00

Tables:   1

The End!