Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018531.1 Corchorus olitorius cultivar O-4 contig18564, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21235

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5875--6269
123
3.3
118
79
12
410
36
10
14
38
1.81
7436--7480
2
22.0
2
95
4
81
48
0
2
48
1.13
9468--9517
21
2.5
20
81
12
59
82
8
6
4
0.96
10110--10199
45
2.1
43
83
6
110
36
17
6
38
1.76
11354--11447
45
2.2
43
86
7
129
37
22
5
35
1.77
12543--13292
385
2.0
380
83
6
969
37
10
14
37
1.81
18010--18050
20
2.0
22
85
9
59
12
7
19
60
1.54
21061--21110
25
2.0
26
88
4
75
50
16
10
24
1.75

Tables:   1

The End!