Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018535.1 Corchorus olitorius cultivar O-4 contig18568, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22249

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--34
2
17.0
2
100
0
68
50
0
0
50
1.00
536--565
15
2.0
15
93
0
51
43
0
16
40
1.48
857--890
18
1.9
17
94
5
59
91
0
8
0
0.43
861--893
15
2.1
15
94
5
57
90
0
9
0
0.44
3007--3068
25
2.6
24
87
5
81
59
4
6
29
1.43
6112--6210
49
2.0
49
100
0
198
27
16
16
40
1.89
11376--11640
76
3.5
76
85
2
345
18
26
35
20
1.95
18627--18666
21
2.1
19
86
13
55
20
27
15
37
1.92

Tables:   1

The End!