Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018537.1 Corchorus olitorius cultivar O-4 contig18570, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20698

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2897--2923
4
6.8
4
100
0
54
51
0
0
48
1.00
5583--6545
210
4.5
211
90
4
1442
37
21
7
33
1.82
12077--12132
29
2.0
28
86
6
78
19
10
32
37
1.86
19803--19842
15
2.7
15
92
0
62
50
12
12
25
1.75
19986--20128
29
4.9
29
86
0
160
37
26
20
16
1.93
20454--20698
30
8.1
30
93
0
382
46
21
15
17
1.84

Tables:   1

The End!