Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018541.1 Corchorus olitorius cultivar O-4 contig18574, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5740

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
221--1520
651
2.0
649
98
0
2530
34
15
12
37
1.86
2462--2494
16
2.0
17
88
5
50
48
0
0
51
1.00
4878--4926
25
2.0
25
91
0
80
16
28
20
34
1.94
4923--4965
21
2.0
21
86
8
61
46
34
0
18
1.50
5377--5421
20
2.2
20
92
0
72
40
24
13
22
1.90

Tables:   1

The End!