Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018544.1 Corchorus olitorius cultivar O-4 contig18577, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24221

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8113--8159
26
1.9
23
87
12
67
40
4
25
29
1.75
10729--10769
21
1.9
22
85
5
57
26
24
12
36
1.91
12286--12427
76
1.9
74
80
8
162
38
11
18
32
1.86
19189--19285
27
3.7
26
80
13
108
16
17
25
40
1.90
23787--23846
16
3.7
16
80
4
75
40
38
13
8
1.75

Tables:   1

The End!