Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018546.1 Corchorus olitorius cultivar O-4 contig18579, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25061

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2480--2504
13
1.9
13
100
0
50
28
0
0
72
0.86
3386--3495
51
2.2
51
82
11
129
44
12
22
20
1.85
15490--15519
15
2.0
15
100
0
60
6
20
40
33
1.78
15748--15828
27
3.0
27
96
0
144
24
24
17
33
1.96
15724--15828
54
1.9
54
84
3
140
27
25
18
28
1.98
16389--17030
46
14.1
46
95
1
1044
30
28
9
32
1.89
16590--16754
22
7.4
22
65
18
90
32
30
7
29
1.86
21598--21657
19
3.0
19
72
13
57
41
13
16
28
1.86

Tables:   1

The End!