Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018553.1 Corchorus olitorius cultivar O-4 contig18586, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18285

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3283--3439
83
1.9
83
82
2
199
47
9
8
35
1.66
6102--6154
24
2.3
24
77
6
56
54
3
1
39
1.29
6774--6836
32
1.9
33
90
3
101
15
28
6
49
1.69
6912--6972
29
2.1
29
87
0
86
32
19
14
32
1.92
8331--8400
35
2.0
35
91
0
113
34
18
21
25
1.96
8661--8696
18
1.9
19
88
5
56
19
5
19
55
1.62
12247--12281
18
1.9
18
94
0
61
37
8
20
34
1.83
12370--12440
11
6.2
11
77
9
79
0
14
11
74
1.07
12377--12447
36
2.0
36
97
0
133
0
14
14
71
1.14

Tables:   1

The End!