Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018560.1 Corchorus olitorius cultivar O-4 contig18593, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10464

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10--48
2
19.5
2
100
0
78
48
0
0
51
1.00
734--911
50
3.5
50
90
2
259
37
11
27
23
1.89
896--983
26
3.4
26
74
10
81
36
12
29
21
1.90
1184--1306
28
4.4
28
84
3
149
17
17
26
38
1.92
2907--3103
29
6.8
29
91
1
306
18
17
22
41
1.90
7195--7225
16
1.9
16
93
0
53
22
0
12
64
1.27

Tables:   1

The End!