Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018576.1 Corchorus olitorius cultivar O-4 contig18609, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11722

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
318--374
15
3.6
15
75
17
53
42
35
12
10
1.77
854--895
22
1.9
22
90
9
68
9
14
28
47
1.75
1510--1586
38
2.0
38
87
5
111
24
11
12
50
1.74
1542--1638
33
2.9
33
84
4
115
27
14
15
42
1.86
10418--11325
31
29.1
31
78
10
819
20
25
13
39
1.90
10392--11323
63
14.9
62
85
6
854
21
26
14
38
1.91
10490--10562
27
2.9
24
82
11
101
20
27
13
38
1.90

Tables:   1

The End!