Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018584.1 Corchorus olitorius cultivar O-4 contig18617, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26569

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1105--1152
22
2.1
22
84
7
60
27
10
0
62
1.27
3799--3972
58
3.0
59
92
1
287
35
14
18
31
1.91
9753--9846
45
2.2
44
83
7
122
38
20
6
35
1.78
12258--12294
19
1.9
19
88
0
56
32
13
13
40
1.84
17876--17972
35
2.8
36
84
9
121
40
10
18
30
1.84
24761--24840
29
2.7
30
84
3
90
30
16
12
41
1.85
26064--26102
20
2.0
20
94
0
69
56
5
0
38
1.22
26061--26113
28
2.0
27
85
7
72
54
3
0
41
1.18
26279--26325
17
2.7
18
84
12
62
44
0
23
31
1.54

Tables:   1

The End!