Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018585.1 Corchorus olitorius cultivar O-4 contig18618, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8641

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2800--2851
25
2.1
25
89
3
79
44
5
17
32
1.72
3417--3566
70
2.1
70
87
2
212
28
17
28
26
1.97
5494--5544
14
3.9
13
76
14
52
33
15
7
43
1.76
5495--5544
26
1.9
25
84
15
66
32
16
8
44
1.76
8298--8506
48
4.4
48
89
3
305
45
20
20
13
1.84
8444--8578
68
2.0
68
92
2
227
46
17
21
14
1.83
8508--8622
48
2.4
48
86
2
178
43
19
23
13
1.87
8392--8622
116
2.0
115
88
3
338
45
19
21
14
1.85

Tables:   1

The End!