Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018589.1 Corchorus olitorius cultivar O-4 contig18622, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28679

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9595--9630
2
18.0
2
100
0
72
0
0
50
50
1.00
10554--10771
109
2.0
109
95
0
391
36
12
19
31
1.90
20489--20539
25
2.1
24
96
3
93
31
27
3
37
1.75
20654--20692
13
2.8
14
88
7
53
74
0
25
0
0.82
22789--23040
123
2.0
126
90
6
404
49
1
10
38
1.46

Tables:   1

The End!