Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018591.1 Corchorus olitorius cultivar O-4 contig18624, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4568

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
469--508
21
1.9
21
94
0
71
25
37
22
15
1.93
541--582
21
2.0
21
100
0
84
23
38
19
19
1.93
470--654
71
2.6
71
92
0
298
30
28
22
18
1.97
612--654
22
2.0
22
85
0
59
25
30
23
20
1.99
2901--2940
15
2.6
16
92
4
64
65
12
10
12
1.49

Tables:   1

The End!