Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018592.1 Corchorus olitorius cultivar O-4 contig18625, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24405

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10--51
21
2.0
21
100
0
84
23
38
19
19
1.93
1--134
71
1.9
70
84
6
182
33
25
20
20
1.97
6417--6607
71
2.7
71
90
1
294
34
27
21
16
1.95
6568--6610
22
2.0
22
85
0
59
25
30
23
20
1.99
19696--19735
15
2.6
16
88
4
55
15
10
12
62
1.54
22936--22961
11
2.4
11
100
0
52
7
15
7
69
1.35
23709--23749
15
2.6
16
88
7
66
14
9
12
63
1.52
24101--24171
26
2.8
25
83
10
83
42
11
12
33
1.79
24129--24185
26
2.2
25
82
11
71
36
12
15
35
1.85

Tables:   1

The End!