Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018608.1 Corchorus olitorius cultivar O-4 contig18641, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18024

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1317--1363
20
2.2
20
88
7
67
51
8
8
31
1.63
9400--9436
19
1.9
19
94
0
65
27
10
16
45
1.80
11062--11121
29
2.1
29
81
6
68
23
15
13
48
1.79
12832--12878
17
2.8
17
93
0
76
21
19
19
40
1.92
13183--13242
30
2.0
30
83
6
77
43
6
16
33
1.74
17705--17729
2
12.5
2
100
0
50
48
0
0
52
1.00

Tables:   1

The End!