Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018611.1 Corchorus olitorius cultivar O-4 contig18644, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9832

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2065--2132
33
2.1
33
97
0
127
48
16
16
19
1.81
2738--2810
29
2.5
29
90
0
110
35
32
13
17
1.89
2890--2966
27
2.8
26
86
7
91
44
24
14
16
1.85
3394--3423
11
2.7
11
94
0
51
36
10
13
40
1.78
5195--5256
30
2.1
30
81
6
72
32
19
3
45
1.66
5205--5244
19
2.2
18
90
4
62
30
22
2
45
1.66
5359--5390
16
2.0
16
100
0
64
56
25
0
18
1.42
5375--5434
28
2.1
28
96
0
111
48
16
11
23
1.79
6059--6237
88
2.0
87
96
1
331
29
21
10
38
1.87

Tables:   1

The End!