Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018625.1 Corchorus olitorius cultivar O-4 contig18658, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31775

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1919--1961
22
2.0
22
86
9
61
30
13
16
39
1.87
11075--11194
24
5.0
24
85
0
141
20
30
20
29
1.98
14685--14770
24
3.6
24
88
0
127
22
32
22
23
1.98
16765--16790
4
6.5
4
100
0
52
23
0
0
76
0.78
21169--21704
54
10.0
53
84
4
494
26
17
23
32
1.97
23079--23313
4
58.2
4
67
17
78
25
10
0
64
1.24
23073--23169
27
3.9
27
71
27
97
28
8
0
62
1.24
23057--23291
46
4.9
47
80
12
232
26
11
0
62
1.28
23079--23291
12
18.2
12
70
18
103
25
10
0
63
1.26

Tables:   1

The End!