Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018629.1 Corchorus olitorius cultivar O-4 contig18662, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37501

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10857--10966
55
2.0
55
92
0
184
30
11
15
42
1.83
12111--12175
2
32.5
2
96
0
121
49
49
1
0
1.10
12173--12201
14
2.1
14
100
0
58
51
6
0
41
1.28
12548--12632
42
2.0
42
90
0
134
44
3
11
40
1.58
14587--14696
55
2.0
55
91
3
177
30
9
18
42
1.81
20656--20683
3
9.3
3
100
0
56
64
0
35
0
0.94
23382--23437
26
2.2
26
100
0
112
39
23
0
37
1.55
24000--24028
6
5.0
6
95
4
51
0
48
0
51
1.00

Tables:   1

The End!