Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018639.1 Corchorus olitorius cultivar O-4 contig18672, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26817

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2170--2237
21
3.1
21
62
22
50
33
4
17
44
1.69
2625--2726
44
2.3
44
86
6
136
39
20
3
36
1.71
9140--9186
24
2.0
24
86
0
67
38
6
42
12
1.69
9167--9214
18
2.7
18
90
9
73
33
10
39
16
1.83
12507--12561
13
4.4
13
76
15
53
32
1
5
60
1.30
18343--18380
2
19.0
2
88
0
58
50
0
0
50
1.00
21080--21150
21
3.4
21
90
3
108
28
25
18
28
1.98
22836--22925
33
2.7
33
80
0
108
45
22
6
25
1.76

Tables:   1

The End!