Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018640.1 Corchorus olitorius cultivar O-4 contig18673, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14847

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4250--4378
49
2.7
48
85
5
172
27
16
6
49
1.69
5084--5151
18
3.8
18
76
0
73
29
47
16
7
1.73
5070--5153
36
2.3
36
78
11
91
29
44
17
8
1.78
6379--6441
30
2.1
30
93
0
108
38
22
26
12
1.90
6385--6438
15
3.6
15
75
9
65
35
25
25
12
1.92
9076--9204
49
2.7
48
83
5
154
28
15
6
49
1.68
9827--9872
23
2.0
23
100
0
92
26
8
21
43
1.81
13529--13674
49
3.0
48
79
10
156
51
6
15
26
1.68

Tables:   1

The End!