Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018642.1 Corchorus olitorius cultivar O-4 contig18675, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10180

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65--109
15
2.9
15
83
9
56
53
4
0
42
1.21
65--112
14
3.1
15
79
11
53
54
4
0
41
1.20
3198--3236
19
2.1
19
100
0
78
48
20
5
25
1.70
5325--5375
19
2.7
19
77
14
61
47
0
1
50
1.12
6726--6827
51
2.0
50
81
9
118
22
21
14
41
1.90
7254--7353
46
2.2
45
87
6
150
41
20
4
35
1.71
7440--7554
56
2.1
56
94
0
203
26
12
29
32
1.92
8920--8980
3
20.3
3
100
0
122
67
0
0
32
0.91
9512--9766
131
2.0
127
92
6
428
37
10
1
50
1.47
9752--9790
14
2.9
13
80
3
51
41
2
2
53
1.28

Tables:   1

The End!