Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018663.1 Corchorus olitorius cultivar O-4 contig18696, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23314

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1380--1455
39
2.0
38
84
5
100
19
27
14
38
1.91
3811--3860
22
2.3
22
75
0
55
38
12
10
40
1.76
11138--11477
168
2.0
168
98
0
653
27
24
12
35
1.92
14905--14948
23
1.9
23
100
0
88
43
40
4
11
1.61
19038--19080
2
21.5
2
100
0
86
51
0
0
48
1.00
20571--20685
58
2.0
58
87
3
169
33
13
20
33
1.92
22535--22941
204
2.0
198
94
2
715
43
8
11
36
1.71
23013--23059
25
1.9
24
95
4
85
55
8
6
29
1.55
23050--23125
39
2.0
38
97
2
143
36
1
9
52
1.42
23051--23111
18
3.2
18
68
28
54
36
1
9
52
1.45
23066--23126
18
3.2
18
68
19
52
34
1
8
55
1.39

Tables:   1

The End!