Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018664.1 Corchorus olitorius cultivar O-4 contig18697, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10089

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2197--2245
22
2.2
22
85
7
64
28
14
4
53
1.59
2382--2441
22
2.7
22
79
5
68
38
10
13
38
1.78
2425--2515
23
4.1
22
84
9
114
36
18
8
36
1.82
2408--2512
46
2.3
46
82
10
128
39
15
8
37
1.78
2539--2582
24
1.9
23
86
9
63
25
18
11
45
1.82
2564--2657
22
4.1
22
67
14
57
35
14
7
42
1.74
2811--2998
22
8.6
22
69
14
86
36
14
8
40
1.76
2789--2948
86
1.9
86
80
7
191
35
14
9
40
1.78
2875--3000
22
5.6
23
74
13
88
36
13
9
40
1.77
3194--3394
22
9.0
22
73
11
144
39
18
8
33
1.81
3242--3390
44
3.3
43
82
7
165
37
17
10
34
1.83
3199--3395
66
3.0
66
77
8
177
39
18
8
33
1.81
9381--9430
25
1.9
27
92
8
86
42
8
0
50
1.32

Tables:   1

The End!