Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018665.1 Corchorus olitorius cultivar O-4 contig18698, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16310

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
130--165
16
2.2
16
90
0
54
58
0
0
41
0.98
3483--3558
16
4.7
17
79
8
79
40
38
13
7
1.73
5173--5229
15
3.6
15
75
17
53
40
36
15
7
1.75
6992--7752
376
2.0
375
93
1
1265
42
12
13
31
1.82
16143--16202
30
2.0
30
96
0
111
36
15
13
35
1.86
16273--16310
2
19.5
2
94
5
69
50
0
0
50
1.00

Tables:   1

The End!