Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018672.1 Corchorus olitorius cultivar O-4 contig18705, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30666

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1851--1901
26
2.0
26
96
0
93
52
9
21
15
1.71
3638--3662
13
1.9
13
100
0
50
40
8
4
48
1.51
5598--5643
18
2.6
18
78
0
56
45
0
2
52
1.13
6993--7094
51
2.0
50
81
9
118
21
22
13
42
1.88
8346--8379
17
1.9
18
94
5
61
73
0
0
26
0.83
9510--9663
78
2.0
77
89
1
236
48
0
12
37
1.47
11210--11267
31
1.9
30
89
3
89
43
1
8
46
1.44
12417--12468
19
2.8
18
77
8
59
48
0
1
50
1.12
12424--12466
22
1.9
22
85
4
59
44
0
2
53
1.13
22845--22884
2
20.0
2
94
0
71
47
0
0
52
1.00
27319--27473
32
4.9
32
77
6
136
34
16
16
32
1.91
27321--27593
60
4.4
62
85
2
248
30
18
18
32
1.95
27386--27619
30
7.7
30
89
0
306
29
20
19
30
1.97

Tables:   1

The End!