Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018675.1 Corchorus olitorius cultivar O-4 contig18708, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22594

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2589--2634
24
1.9
24
90
0
74
21
15
39
23
1.92
5698--6267
296
1.9
296
94
0
1005
29
20
20
29
1.98
6610--7198
244
2.4
242
88
5
867
36
13
11
38
1.80
15619--15663
18
2.5
18
96
0
81
11
20
33
35
1.88
15619--15669
18
2.8
18
90
0
57
13
17
31
37
1.89
18996--19021
9
2.9
9
100
0
52
30
11
11
46
1.76
20523--20725
36
5.6
36
78
12
177
30
17
18
33
1.94

Tables:   1

The End!