Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018688.1 Corchorus olitorius cultivar O-4 contig18721, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15026

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1947--1981
15
2.4
14
90
9
61
17
5
14
62
1.49
2785--2915
66
2.0
66
95
0
235
19
15
9
55
1.66
2887--3084
99
2.0
99
96
0
369
29
10
9
51
1.67
4042--4370
176
1.9
176
97
1
622
32
10
13
43
1.77
5348--5394
22
2.1
22
92
0
76
44
8
21
25
1.80
6654--6690
18
2.1
17
90
5
56
62
13
2
21
1.44
7873--8020
36
4.1
36
80
0
161
45
18
28
7
1.77
11388--11424
18
2.1
18
100
0
74
45
21
10
21
1.82

Tables:   1

The End!