Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018691.1 Corchorus olitorius cultivar O-4 contig18724, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27860

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3011--3063
21
2.5
21
100
0
106
32
18
18
30
1.96
8558--8604
26
1.9
23
87
12
67
40
4
27
27
1.75
14058--14085
2
14.0
2
100
0
56
50
0
0
50
1.00
18329--18367
16
2.4
17
82
8
53
71
7
12
7
1.29
21255--21478
82
2.7
82
98
0
430
33
17
6
42
1.74
21493--21751
131
2.0
129
87
9
375
38
11
2
47
1.53
22289--22331
16
2.8
15
77
19
52
9
18
34
37
1.83
22288--22338
15
3.3
15
73
13
50
7
19
37
35
1.81
22379--22412
16
2.1
16
88
0
50
11
17
32
38
1.86
23452--23495
19
2.3
20
80
11
56
47
0
2
50
1.13

Tables:   1

The End!