Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018692.1 Corchorus olitorius cultivar O-4 contig18725, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60770

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8512--8557
21
2.2
21
84
7
58
23
4
8
63
1.42
9878--9907
16
1.9
16
93
6
53
36
3
13
46
1.60
22348--22395
19
2.6
19
78
15
55
45
0
2
52
1.12
28142--28188
21
2.2
21
96
0
85
34
4
29
31
1.77
37205--37244
15
2.6
16
84
8
55
77
5
17
0
0.94
40468--40494
10
2.7
10
100
0
54
92
0
7
0
0.38
40468--40497
11
2.8
11
95
5
53
90
0
10
0
0.47
51191--51275
22
3.7
23
74
13
84
52
1
2
43
1.21
51204--51271
12
6.3
11
76
15
54
52
1
2
42
1.25

Tables:   1

The End!