Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018696.1 Corchorus olitorius cultivar O-4 contig18729, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10576

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1228--1268
20
2.1
19
86
13
57
14
14
12
58
1.63
5869--5924
23
2.4
23
88
5
78
66
16
1
16
1.35
6513--6662
50
3.0
50
93
0
246
32
15
13
38
1.86
7093--7261
91
1.9
91
83
5
225
27
19
14
38
1.90
7330--7721
50
7.8
50
92
1
599
30
27
13
28
1.94
8005--8078
29
2.7
27
83
8
96
18
12
24
44
1.84

Tables:   1

The End!