Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018699.1 Corchorus olitorius cultivar O-4 contig18732, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19877

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1670--1717
23
2.0
23
88
12
69
27
20
6
45
1.75
6271--6302
16
2.0
16
93
0
55
53
12
9
25
1.68
7902--7988
43
2.0
42
91
2
138
21
16
19
42
1.89
9523--9567
20
2.2
21
88
4
65
13
37
13
35
1.84
10596--10747
58
2.7
56
78
12
163
30
15
6
47
1.71
10707--10846
57
2.4
56
75
12
131
28
20
8
42
1.81
10708--10924
119
1.8
117
82
5
276
29
20
8
41
1.83
10587--10970
59
6.6
59
72
9
168
28
19
7
44
1.79
11071--11353
36
7.9
36
78
7
249
32
15
9
42
1.79
11071--11277
106
2.0
105
81
4
247
32
16
9
40
1.81

Tables:   1

The End!