Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018717.1 Corchorus olitorius cultivar O-4 contig18750, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3411

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
852--885
11
3.1
11
100
0
68
38
8
44
8
1.67
1592--1648
16
3.6
16
83
4
62
31
14
24
29
1.94
2518--2587
25
2.8
25
93
0
122
22
28
28
20
1.98
2804--2836
14
2.3
15
94
5
59
12
36
27
24
1.91
3063--3179
40
2.8
42
76
5
121
24
29
24
21
1.99
3094--3196
40
2.5
40
85
1
125
24
29
23
23
1.99
3172--3229
30
1.9
30
89
0
89
22
27
24
25
2.00
3237--3302
34
1.9
34
84
6
89
34
25
25
13
1.93

Tables:   1

The End!