Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018720.1 Corchorus olitorius cultivar O-4 contig18753, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4695

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
145--204
15
4.0
15
73
0
57
31
20
35
13
1.91
1637--1689
12
4.4
13
81
11
60
45
9
5
39
1.60
2087--2149
27
2.3
28
78
8
76
41
14
22
22
1.89
2087--2161
27
2.7
27
77
6
71
40
13
20
26
1.89
2929--3007
34
2.3
33
80
10
79
1
31
2
64
1.15
2947--3001
6
9.5
6
84
9
53
0
27
0
72
0.85
2963--3014
18
3.1
17
73
15
54
0
32
0
67
0.91
2947--3014
34
2.0
33
88
8
102
0
30
0
69
0.89

Tables:   1

The End!