Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018722.1 Corchorus olitorius cultivar O-4 contig18755, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18902

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--558
31
17.2
31
82
7
596
37
13
27
21
1.91
16--558
65
8.3
64
86
5
591
36
13
27
21
1.91
1--558
160
3.4
160
93
3
904
37
13
27
21
1.91
1--553
129
4.3
127
82
8
607
37
13
27
21
1.91
5027--5061
2
17.5
2
93
0
61
54
0
0
45
0.99
11091--11120
2
15.0
2
100
0
60
50
0
0
50
1.00
13336--13375
21
1.9
21
84
0
53
10
37
25
27
1.88
13502--13554
21
2.5
21
90
6
81
1
37
18
41
1.62

Tables:   1

The End!