Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018729.1 Corchorus olitorius cultivar O-4 contig18762, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8411

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3438--3525
43
2.0
43
100
0
176
38
11
11
38
1.77
3548--3591
21
2.1
21
86
0
61
59
13
15
11
1.62
3643--3685
21
2.0
21
90
0
68
60
18
9
11
1.57
4144--4191
19
2.6
19
76
3
53
0
33
0
66
0.92
4152--4191
19
2.1
19
86
9
55
0
30
0
70
0.88
4542--4570
6
4.8
6
100
0
58
65
17
17
0
1.27
4896--4925
3
10.0
3
92
0
51
0
36
0
63
0.95
7263--7297
11
3.2
11
95
0
61
22
0
17
60
1.37
7383--7424
21
2.0
21
100
0
84
38
4
9
47
1.57

Tables:   1

The End!