Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018730.1 Corchorus olitorius cultivar O-4 contig18763, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8250

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1911--1951
21
2.0
21
85
9
57
41
34
2
21
1.67
1945--2041
19
5.3
19
72
16
89
43
22
4
29
1.72
1912--1967
27
2.1
27
89
0
85
42
30
3
23
1.71
1962--2023
17
3.4
17
75
16
61
43
25
3
27
1.70
1945--2042
38
2.7
36
80
14
121
42
23
4
29
1.72
1945--2040
17
5.4
17
68
24
56
42
22
4
30
1.72
2094--2126
16
2.1
16
94
0
57
48
21
6
24
1.72

Tables:   1

The End!