Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018732.1 Corchorus olitorius cultivar O-4 contig18765, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11855

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6--228
4
56.0
4
89
0
214
0
10
49
39
1.43
304--349
2
23.0
2
86
0
65
0
6
50
43
1.28
189--424
121
2.0
119
95
1
427
19
10
31
37
1.86
2096--2201
31
3.5
29
69
10
70
29
28
19
22
1.98
4058--4104
3
15.7
3
90
0
76
36
2
0
61
1.08
4252--4313
26
2.4
26
80
0
79
46
14
4
33
1.66
5210--5248
16
2.4
16
100
0
78
5
28
35
30
1.79
11222--11291
36
1.9
36
97
0
131
32
17
11
38
1.85

Tables:   1

The End!