Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018737.1 Corchorus olitorius cultivar O-4 contig18770, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20869

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2245--2372
67
1.9
67
96
0
238
28
17
7
46
1.74
4296--4352
19
2.9
21
82
12
59
10
8
26
54
1.63
4302--4378
19
4.1
19
82
0
91
14
9
25
50
1.72
10654--10702
25
2.0
25
84
4
64
32
28
0
38
1.57
12446--12517
24
3.0
24
80
6
85
9
18
29
43
1.81
12615--12666
18
2.9
18
82
0
77
40
28
1
28
1.67
14197--14233
13
2.8
13
100
0
74
24
13
24
37
1.91
15022--15052
13
2.4
13
100
0
62
51
12
0
35
1.40
16314--16390
12
6.5
12
81
1
93
15
31
2
50
1.58
16316--16399
24
3.5
24
86
3
107
16
29
2
51
1.57

Tables:   1

The End!