Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018758.1 Corchorus olitorius cultivar O-4 contig18791, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34671

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1785--1894
36
3.0
36
94
5
202
26
16
19
38
1.92
12319--12386
30
2.3
30
97
0
127
36
20
20
22
1.95
15401--15502
51
2.0
52
81
9
120
22
23
13
40
1.90
16116--16169
28
1.9
28
84
0
72
62
11
7
18
1.50
20641--20688
24
2.0
24
91
4
78
14
12
14
58
1.64
22677--22723
16
2.9
16
84
12
60
0
4
17
78
0.90
23597--23669
27
2.5
30
74
12
73
19
24
16
39
1.91
25240--25286
22
2.1
22
84
0
58
31
6
4
57
1.43
27422--27453
2
16.5
2
93
6
57
46
0
0
53
1.00
28567--28614
23
2.1
23
88
7
71
39
20
12
27
1.89
28710--28748
7
5.9
7
90
6
55
0
46
0
53
1.00

Tables:   1

The End!