Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018765.1 Corchorus olitorius cultivar O-4 contig18798, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7547

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1491--1540
14
3.5
14
83
8
57
34
14
10
42
1.78
4694--4844
22
6.9
22
80
3
180
13
23
5
56
1.60
4690--4844
65
2.4
65
87
1
229
13
23
5
56
1.59
4855--6753
47
39.1
47
83
7
2212
23
21
6
48
1.73
4835--6753
148
13.2
148
89
4
2755
23
21
6
48
1.73

Tables:   1

The End!