Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018781.1 Corchorus olitorius cultivar O-4 contig18814, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53966

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7466--7491
2
13.0
2
100
0
52
50
0
0
50
1.00
7872--8007
27
4.9
28
75
7
100
37
26
17
18
1.93
15853--16071
38
5.9
38
76
14
217
39
17
20
23
1.92
15890--16069
69
2.5
69
81
13
186
40
16
19
23
1.91
16160--16204
16
2.8
16
86
10
56
0
0
24
75
0.80
24884--24945
21
3.0
21
92
2
108
29
25
14
30
1.95
35041--35079
20
2.0
20
89
0
60
38
12
20
28
1.89
46085--46114
12
2.4
13
88
11
53
66
13
6
13
1.43

Tables:   1

The End!