Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018784.1 Corchorus olitorius cultivar O-4 contig18817, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29822

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11729--11803
32
2.3
32
84
4
89
49
9
12
29
1.71
24368--24393
13
2.0
13
100
0
52
23
0
23
53
1.46
25917--26036
45
2.7
45
97
0
222
31
30
18
20
1.96
29329--29598
35
7.8
35
91
1
420
39
20
12
27
1.89
29329--29822
70
6.9
70
79
11
509
37
20
14
27
1.91
29491--29721
122
1.9
122
90
1
374
37
20
14
27
1.92
29456--29756
157
1.9
156
89
2
469
37
20
14
27
1.92
29421--29787
191
1.9
191
90
4
580
37
20
15
26
1.92
29612--29822
68
3.1
69
88
2
291
36
20
15
27
1.93
29612--29822
35
6.1
35
85
2
293
36
20
15
27
1.93

Tables:   1

The End!