Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018787.1 Corchorus olitorius cultivar O-4 contig18820, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10361

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4557--5537
35
27.6
35
77
5
734
18
19
18
42
1.89
4558--5509
71
13.4
69
76
8
455
18
19
18
42
1.89
4807--5516
250
2.9
249
87
2
977
18
19
18
43
1.89
5927--6021
30
3.2
29
83
5
118
21
16
20
42
1.90
5945--6698
30
24.4
30
82
8
872
20
12
16
49
1.79
6024--6129
39
2.7
39
80
8
135
21
12
15
50
1.76
5855--6219
168
2.2
169
85
3
479
20
14
17
46
1.83
6103--6698
121
4.9
121
87
3
878
20
12
16
49
1.78

Tables:   1

The End!