Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018796.1 Corchorus olitorius cultivar O-4 contig18829, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41955

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1816--1858
21
2.1
20
82
4
50
13
27
18
39
1.89
3675--3826
76
2.0
76
83
5
191
17
29
28
25
1.97
10790--10819
12
2.5
12
94
0
51
30
6
0
63
1.20
24720--24752
15
2.2
15
100
0
66
33
6
6
54
1.50

Tables:   1

The End!