Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018800.1 Corchorus olitorius cultivar O-4 contig18833, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45319

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6084--6124
21
1.9
22
90
5
66
12
29
43
14
1.82
6191--6361
75
2.3
75
89
0
252
11
29
40
18
1.85
11274--11321
11
4.8
10
80
17
55
31
20
2
45
1.63
22057--22129
36
2.0
36
91
0
119
28
20
16
34
1.94
40674--40699
2
13.0
2
100
0
52
50
0
0
50
1.00
41593--41626
11
3.1
11
100
0
68
64
0
0
35
0.94
40698--42558
666
2.8
649
88
8
2743
39
13
12
34
1.82
44398--44546
22
6.8
22
71
8
90
36
12
8
42
1.73

Tables:   1

The End!