Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018801.1 Corchorus olitorius cultivar O-4 contig18834, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41084

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
804--893
34
2.7
34
83
6
114
37
17
18
25
1.93
8701--8767
30
2.2
30
91
2
107
26
8
29
34
1.87
17910--17943
2
17.0
2
100
0
68
50
0
0
50
1.00
20283--20343
30
2.0
30
96
0
113
26
24
13
36
1.92
25131--25419
126
2.3
123
87
1
389
30
13
19
37
1.90
25131--25436
41
7.4
41
88
2
387
30
13
18
37
1.90
26273--26453
77
2.6
64
74
20
182
17
19
12
50
1.77
26304--26453
77
2.0
77
89
3
234
16
19
11
53
1.72

Tables:   1

The End!